rs48307462 SNP Detail

Summary

• ID
  rs48307462
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150269520 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGGTGAAAAT GTATTTGAAT GAGGGGCCCA GGTTCCAGCC
  CTAGCAAGCA GCAGAATTTG GCAGTTTTGG CCACGTGGTT CTGGCTTTAG AGTCAAGGAT
  W
  AAAAAAAATG GGTTATGGAG TCTCCTTCAC ACCCGAGGCA AGCCGTTGAG GCCAGGTTTG
  TCTCTGCTAA GTCGTGCTGC GGCTGCTGCT GCTGTCCCA                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	LG/J	SM/J
ss148049530	ENSMUSSNP2183143	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
ss321428579	CHEV_4_149559172	CHEVERUD	SCREENING_POP	f	SNP			A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	LG/J	SM/J
rs48307462					SNP	A	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150269520 () rs orientation: forward

Symbol	Name	Function Class
Car6	carbonic anhydrase 6	1952 bp downstream
Rr605217	regulatory region 605217	1450 bp proximal
Rr605218	regulatory region 605218	1657 bp proximal