rs48305976 SNP Detail

Summary

• ID
  rs48305976
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:101469478 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CATCTCTAGC CCTCCCCAAC CCTTCATTCA TTATATGTAT
  GAAACAGATG CCGTTGTGTG CACAGAACTA TGTTTGAGTT GTGTGCACAG AACTATGTTT
  A
  ACTGGCTTTG GTAAGCGAAT TCAAGGACAA GTCGCACACT ACCCAAACCC TCCAAGCCAA
  AGCTGGGAGC ACAAGAAGGC CTGGCCCTGC AGAGATATA                       
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	LG/J	SM/J
ss135548594	ENSMUSSNP503868	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
ss320852565	CHEV_3_101366085	CHEVERUD	SCREENING_POP	f	SNP		A	A
SNP Consensus Information
SNP					Consensus Type	DBA/2J	LG/J	SM/J
rs48305976					SNP	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:101469478 () rs orientation: forward

Symbol	Name	Function Class
Rr582081	regulatory region 582081	545 bp distal
Rr582082	regulatory region 582082	421 bp proximal