rs48304128 SNP Detail

Summary

• ID
  rs48304128
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:163553299 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACAGTATGC TGGGTAGAGC
  ATAGTCGCTA AGAGGGTGGG GCTTTAAAAT TGATATCCCA AATTGTTGGT TTTTTTCCTA
  TTGCTGTGGA TTAGGAATTT TGAGGTAGGT GGGGTAAGGA GGGGCTGATA TTTGGGATGT
  AAAGTGAATT GAATAAATTA AAAATTTTTG AGGCAAATTC ATAGACTCAA CCAAACATCA
  K
  CGAAAAGACT GAAGAATTTG ATCTCCAGCA CAAAATCCAA TGAAGAGGAT TAGCACGAGG
  GAGGCTGAGG CAGGAGAATC AGAGGTTTGA GGCCAGCCTG GGATACATTA TGAGACTTTG
  ACTCGAAACC AGAAACTACA AGTGAGAAAA TTCAGCAGAG AACTTTGCTT AAGCGTGGTG
  AGTGCATCTG GTGTTTGTGT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss148209704	ENSMUSSNP4291086	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs48304128					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:163553299 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Pkig	protein kinase inhibitor, gamma			Intron
				mRNA-UTR
Rr569473	regulatory region 569473			296 bp distal
Rr569474	regulatory region 569474			998 bp proximal