rs48302182 SNP Detail

Summary

• ID
  rs48302182
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:143914128 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAGGAGCCGA ATGGATCCCA
  GATAAAGCCT TTGCTTTCCC TACTTGCCCT GAAATTATTT TTCTGTACTT CATCTTCTCA
  ACTAAGGTCT TACTCCTGGA CTTTATAGGC AGGAGTTGAA GATAAGCATC TAGCTCTTTG
  ATGAGGAAAA GGAGAAGAGA TTGTGCCCTT AGAAGGCCAG TGCAAAGCTG GTTTCTGATT
  G
  GAGGCTGTTT AGAAAGGACA TTTTACAAGG ATGATTGTCC ATTACTCTGC CATCAGAGAG
  ATCCTTAGAA CTCCAAAGGT CCAGTAGAGT TGCCATAGTG AGGGAACTAA ACACTAAGGT
  AGACTAGCTG GTGGGTTGCG TTTCTCTAGG CTGGGTGTGC GGCACACAGT GCAGTAACTA
  GGACCCAGGA ACGCTGAAGC                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss136029310	ENSMUSSNP2769719	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs48302182					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:143914128 () rs orientation: forward

Symbol	Name	Function Class
Rr586603	regulatory region 586603	437 bp distal