rs48286357 SNP Detail

Summary

• ID
  rs48286357
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:148647326 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCAAGCTAG ATATTTCCAG
  ACAGGCTGTG CAAGTCTATA TAAGATATCA TAGCAAAATG TCATTACTTG TCAAATGACA
  AAAATGCCTA CTTCCTAAAA GGAGAAAATC ACAGGACAAG ATCATGAGAA TTTTCAAAGA
  ACTGGAGACA ACCATTGTTC ATCATGTCTA AACTGATGTC ACAGAAAGCC AGCATAACAC
  R
  GAGTTCATCC CCAGACTTCT AAGAAAGAAG TTCCACACAC AGAGAGAAGA CACCAATGTC
  AGCTGACTGG GTTCTGAGAA GGTTACTGTC ACCTATGTGA TTTTAAAAAA CAAAAAACCT
  AACCCCCAGA GGGATGAAGC TCTGCGTAGC CAGTGGCTGC TACAGTTAAG TTCTCAATAC
  CCTAACACTC AGACGGGAAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss136065535	ENSMUSSNP6111473	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
ss321016879	CHEV_3_148604654	CHEVERUD	SCREENING_POP	f	SNP		A	G
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs48286357					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:148647326 () rs orientation: forward

Symbol	Name	Function Class
Adgrl2	adhesion G protein-coupled receptor L2	Intron
Rr587231	regulatory region 587231	1735 bp distal