rs48283815 SNP Detail

Summary

• ID
  rs48283815
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:15639876 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C AAATAAAAGA AGGATTTAAA AATGTAGGCA ATTTTTATTT
  TAATATTTTC GCCTGCAAAC TATTCCTGCT TCCTTTGGCA AAGAAATAAA AATTTTCAGT
  Y
  TAGGGAGCTT CAATGTAGCA CATGAATATT ACATTTAAAA AAAAAGAGAG AGAACTCGAT
  TTAAACTGTT TCAAACAGGG AGGGGATTGG AGGGAGCTGA G                    
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss133006726	ENSMUSSNP4840109	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs48283815					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:15639876 () rs orientation: forward

Symbol	Name	Function Class
Gm36352	predicted gene, 36352	120 bp upstream
Gm44039	predicted gene, 44039	1508 bp downstream
Rr626670	regulatory region 626670	656 bp distal
Rr626671	regulatory region 626671	within coordinates