rs48282181 SNP Detail

Summary

• ID
  rs48282181
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:152049003 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAATGTGTGT GTGTGTGTGT
  ACACGTGTGT GTGTGTGCAT GTGCATGCGT GTGTGCCTGC TTGAATTTCT GTGTACCGCA
  TGCGTGCAGG AACCTAAGGA GGCCAGAAAA GGGCATCAAA TCTCTTAGAC TTGGAATTAC
  AAGTGTTTGT GAGCCGCCAA GTGGCTGCTG GGAAACTAAC TCAGGTCCTC TACGGATTCT
  K
  GGAAACACTC TCAGCTGCTC TTCAAGAGCA TCAAGTGCTC TTAATGGTTG AGGCATTTCT
  CTGGCCCTTC CTAGCTTATT TTAAAATTAT TATTATTATT ATTATTAAAA TTGTGTGTGC
  GTGTATACAC GTGTGTGTGT GCGTGCATGT AAGTGATAGT ATCTTTGGAG GTCTGGGTAT
  CAAAGGTGGT CAGCTCGCCT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss136102557	ENSMUSSNP1570057	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	G
ss321028695	CHEV_3_152006330	CHEVERUD	SCREENING_POP	f	SNP				G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs48282181					SNP	T	T	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:152049003 () rs orientation: forward

Symbol	Name	Function Class
Rr587533	regulatory region 587533	within coordinates