rs48275904 SNP Detail

Summary

• ID
  rs48275904
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:164707696 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGCCA CCTCAGAAGT CTGCTGGACC
  A
  CACCTCCCTC CCTACAGCCT AGTCT                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320606968	CHEV_2_164691276	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs48275904					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:164707696 () rs orientation: forward

Symbol	Name	Function Class
Gm75526	predicted gene, 75526	395 bp downstream
Rr374207	regulatory region 374207	600 bp upstream
Rr569739	regulatory region 569739	761 bp proximal
Rr569740	regulatory region 569740	1961 bp proximal