rs48275375 SNP Detail

Summary

• ID
  rs48275375
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:104567534 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCACTCCTG CCCTTCGGAG
  AGTTTAAGTT TGGTTCCTAG CACCCAGGTC AGGCAGCTCC CAACTCTTTT GACACCTGCT
  GCAGGGGACC TCTTATAGTA CATAATAAAT AAAATATTGT AAACCTGGAG GTCAGCTAGG
  CATTCTATCC AACATCTTTA ATCCCAGCAC TTGGGCAGCA GAGACAGACT AGCCTAGTCT
  G
  CACAGTAAGT TCCAAAATAT CCAGGGCTAC ATAGAGAAAC CTTGTTGAAA ACAAAAAAGC
  TGGAGGTCAA GCCTAGGCTA CATGAGATCC TGCCTCAGAA AATTACAGGG TTTTTGTTGT
  TTTTAATATG AGTTTTTGTT TTGGTGTTTG GGATTGGAAC CAGAACTCTT AGCTAGGAAA
  ATACATCCTT GACTTTTTTT                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss135570194	ENSMUSSNP6219727	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs48275375					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:104567534 () rs orientation: forward

Symbol	Name	Function Class
Gm29561	predicted gene 29561	1125 bp downstream
Rr582564	regulatory region 582564	263 bp proximal
Rr582565	regulatory region 582565	1637 bp proximal
Slc16a1	solute carrier family 16 (monocarboxylic acid transporters), member 1	1756 bp downstream