rs48270750 SNP Detail

Summary

• ID
  rs48270750
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:38034111 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GACAC ATCTCAGTGA TACCTGGGGG
  C
  TAAAGGAGGG ATGAGAAGAA CAGGC                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss134819157	ENSMUSSNP1352183	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C
ss320714484	CHEV_3_37878884	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs48270750					SNP	C	C	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:38034111 () rs orientation: forward

Symbol	Name	Function Class
Gm20755	predicted gene, 20755	within coordinates
Rr575601	regulatory region 575601	940 bp distal
Rr575602	regulatory region 575602	27 bp proximal
Rr575603	regulatory region 575603	107 bp proximal
Rr575604	regulatory region 575604	1865 bp proximal