rs48255526 SNP Detail

Summary

• ID
  rs48255526
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:37782119 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATAAACGTGA GGGCCTGAAT
  TCGAGCCCCA GGACCTACAA CCTATGTCAA GAAAGGCAGG TACATAGCTC TTGGGAGGCA
  GAGGCAGGCA GATTTCTGAG TTCTAGGCTA GCCTGGTCTA CAAAGTGAGT TCCAGGACAG
  CCAGGGCTAC ACAGAGAAAC CCTGTCTCAA CCCCACCCCC CCCCCCCAAA AAGAAAGAAA
  R
  GCAGGTACAG TGGGGCACTT GTAGTCTCAA TGCTAAGGAG AGAGAGGCAG GGGATAGCCA
  TGTGGCTCAC TGCAGGCCAG CCTTGCTAAG ATGGTGACCC CAGCCCAATG ATAGACCATG
  GCTCAACAAC AGGAGGGCTC CTGACAAGTG ACACTCAAGA CTGACCCTCA GGCTTCACCC
  TCATGGACAC ACAGGCAGGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss134812127	ENSMUSSNP3834797	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs48255526					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:37782119 () rs orientation: forward

Symbol	Name	Function Class
Gm36620	predicted gene, 36620	within coordinates
Rr575551	regulatory region 575551	878 bp distal
Rr575552	regulatory region 575552	160 bp proximal
Rr575553	regulatory region 575553	1174 bp proximal