rs48247550 SNP Detail

Summary

• ID
  rs48247550
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:12626486 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGAAAGTGGG TTAAATCTTG
  TGACTAAAAT TACTGTCCTT AATTTTTTAA TTTTTAGTTC ACAGACCATT GTTGTTTCAT
  GATTCACAAT TATGGGAAAG AATCCTTAGT TCTTATTCCT CTTGATTGCA TTGACTCTTT
  ATATCTAATT TGTTCAGTTA ATAAAGGAGC TGAAGGGGTT TGTAACCCCA TAGGAAGAAT
  R
  ACAATATCAA CCAACCAGGC CCCCAGAGAT CCCAAGGACT AAACCACCAA CCAAAGAGTA
  CACATGGGGG GACCCATGGC TCCAGCTGCA TAAGAATCAG AAGATGACCT TATCTGGCAT
  CAGTGGGAGG GGAGGCCCTT GGTCCTGTGA AGGCTTGATG CCGGGGCAGT GAGGTGGGAG
  TGGGTGGGTG GGTGGGGGAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	MSM/Ms
ss146023302	ENSMUSSNP6085002	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	MSM/Ms
rs48247550					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:12626486 () rs orientation: forward

Symbol	Name	Function Class
Gm37985	predicted gene, 37985	within coordinates
Rr589092	regulatory region 589092	608 bp proximal