rs48246664 SNP Detail

Summary

• ID
  rs48246664
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:121572354 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCTTT TCCCTAATTA CAGCCACTAT
  S
  CCCCTGCCTC CCTAGAGCAT GAAAC                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss135729117	ENSMUSSNP4308201	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G	C
ss320905799	CHEV_3_121481623	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs48246664					SNP	C	G	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121572354 () rs orientation: forward

Symbol	Name	Function Class
Abcd3	ATP-binding cassette, sub-family D member 3	Intron
Rr584166	regulatory region 584166	350 bp distal
Rr584167	regulatory region 584167	478 bp distal
Rr584168	regulatory region 584168	132 bp distal