rs48241746 SNP Detail

Summary

• ID
  rs48241746
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:18476797 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C AGAAGGAACG AAGGAACACA AATGGTCACA GTAAACATAG
  GAAGAAGGGT GAAAATCTTA CTTTTTTTTT TTTTTTTTTT TTTTTTTACA ATTTCAGCCT
  Y
  TTTCCTACAT ATAAGAACCA TAAACGTAGA CTAGGAAATG GGCTAAAAGT GGATGTTTTC
  AAAGCTTGGG AAACCACCTC GCCATGGGAG GCTAGAGCCT A                    
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss134657823	ENSMUSSNP238221	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs48241746					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:18476797 () rs orientation: forward

Symbol	Name	Function Class
Gm30667	predicted gene, 30667	within coordinates
Gm65503	predicted gene, 65503	within coordinates
Rr573897	regulatory region 573897	217 bp distal