rs48205956 SNP Detail

Summary

• ID
  rs48205956
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:149960176 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACTTA CACTGAGAGC CCCACTGGAC
  R
  CCAGACTGAG GTCTACTCTC TCTGA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss148042296	ENSMUSSNP2856840	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
ss321427090	CHEV_4_149249828	CHEVERUD	SCREENING_POP	f	SNP			G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs48205956					SNP	A	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:149960176 () rs orientation: forward

Symbol	Name	Function Class
Rr367784	regulatory region 367784	588 bp upstream
Rr605091	regulatory region 605091	1372 bp distal
Rr605092	regulatory region 605092	1687 bp proximal