rs48185104 SNP Detail

Summary

• ID
  rs48185104
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:79897085 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGTGT CCCTGGTGTG TAATGGCCTG
  T
  AGGAAGCATA CATCTACTTC TCTTC                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss135377962	ENSMUSSNP4312516	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs48185104					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:79897085 () rs orientation: forward

Symbol	Name	Function Class
Gm65044	predicted gene, 65044	within coordinates
Rr1544	regulatory region 1544	within coordinates
Rr578626	regulatory region 578626	69 bp distal
Rr578627	regulatory region 578627	231 bp proximal