rs48183848 SNP Detail

Summary

• ID
  rs48183848
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:60703945 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTCAACAAC GAGTTTACAG
  AAAATAGACA ACTGCTATAT TAAAAGCCTG ATAGCCATAT GACCGTATTG CTGGTTGTGC
  TGGCAAACAC CAGCAGGATA CACTCCAATG CTGAAGACTG GAGGGTCATA GGAAATACAA
  CCTTATCTCT CTTAAACAGC AACCAACACA CAAAAGTTAG TGTTTTCTTC TATGAATAAA
  Y
  CAAAAGTACA CTTTATTTCC TAACAAAAAG CTATATAAAA ACATTTAAAA CTGTTTATAA
  TTTATGCTTA CCCTTACATG AAAATAAATA CAAAAATCAT TAATATTTTT TTCAGTTACA
  TTTATTGAGA CTTTCTGCTC CAGTTACTCA AAGAAATTGT GTTTAACTAG TCCCTCATAG
  AGTTTACAGT GTATTGGCAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss135220964	ENSMUSSNP1389543	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs48183848					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:60703945 () rs orientation: forward

Symbol	Name	Function Class
Gm37035	predicted gene, 37035	within coordinates
Gm38326	predicted gene, 38326	1796 bp downstream
Rr577459	regulatory region 577459	1302 bp proximal