rs48183501 SNP Detail

Summary

• ID
  rs48183501
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr17:68195878 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCATA AAAATCGTTC TTCCTCAGCC
  K
  GCCTGACCAT GTTTTCTGTT TCCAG                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss145860143	ENSMUSSNP5828110	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T
ss325433446	CHEV_17_68238223	CHEVERUD	SCREENING_POP	f	SNP			T	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs48183501					SNP	G	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:68195878 () rs orientation: forward

Symbol	Name	Function Class
Arhgap28	Rho GTPase activating protein 28	Intron
Gm65042	predicted gene, 65042	within coordinates
Rr392889	regulatory region 392889	372 bp upstream