rs48182953 SNP Detail

Summary

• ID
  rs48182953
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr14:70010886 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACATGCCCAC AGCCAATCTG
  ATGCAGGCAG TCCCTCAGTT GTGATAGCCA TTTCCCAAGT ATGTCTAACT AGGGCACGCG
  TCTTCACCAC AGCTCTGGGA ATCCCGAAGT TTGCTTAATC AGTTTTCTTT CCATCCTCAG
  GCCAGTACCT GTCAGAAGGG AACTGCAAGC CTTGCAGAGA GGGTATTGAC TACACCAGCC
  A
  TTCCAACCAT TCTCTGGATT CATGTATTCT CTGCACAGTC TGTAAGGAAG GTACAGAGCA
  AAGGGGCCCT TCCCACAGGA GGAGCATGGG CAGGGGGATT CATAACTGCA GTGAACTGGA
  AAACTTCAGT TCCAGCCATC TTGATCTTCA TTTTTCCCTG TTCTCCGCCT GTCTTTAGTT
  CAATGGGACA AAACCACAAG                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss139676596	ENSMUSSNP1237142	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	A/J
rs48182953					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:70010886 () rs orientation: forward

Symbol	Name	Function Class
Rr494754	regulatory region 494754	592 bp proximal
Tnfrsf10b	tumor necrosis factor receptor superfamily, member 10b	Coding-NonSynonymous
Tssr126377	transcription start site region 126377	1671 bp upstream
Tssr126378	transcription start site region 126378	1720 bp upstream