rs48174993 SNP Detail

Summary

• ID
  rs48174993
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:81955508 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAAAAAAAA AAAGATCTGA
  GATTATCAGT ATTTACCCTC TTCATGTTCT TGGTGGGAAG TAAATGGGCT CATTTCTCCT
  GTCCAACCAA ACCAGGTCTA CCCACAATGA CTCGCTCCTC AAATCTGAAA GCAAATTTAG
  AAAGAAGAAA TTGGGATGAG ACTTCACTAT ATCTGGTGGC ACCACATCCC AGGAAAATGA
  W
  CAATGTATCT TAGAGATAGG ATTCTAAGAC GAAGTAAATA GGTGAGTCAC AAATTAGGAA
  GGTTGCCTCA TTTCTGCTTT TCATGTATCC TGAGAAAAGA GGAAAGATTC CAAGTTTCCC
  CTTAGACTTA GCTCAGGTCT CCAATCCAGA ATAAACAGCA ATAAGGGGCT GCTACAAGAA
  GGATACAGAG GGTTTTCTAC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss146857313	ENSMUSSNP5832035	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs48174993					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:81955508 () rs orientation: forward

Symbol	Name	Function Class
Gm11264	predicted gene 11264	within coordinates
Rr594276	regulatory region 594276	1752 bp distal