rs48168747 SNP Detail

Summary

• ID
  rs48168747
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:19716629 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTGTG TGTGTGTGTG TTCTTATAAA
  R
  TACAGATTGT TTTATATATG TGCGT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss134669600	ENSMUSSNP4716590	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	G
ss320679356	CHEV_3_19562465	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs48168747					SNP	G	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:19716629 () rs orientation: forward

Symbol	Name	Function Class
Rr574018	regulatory region 574018	777 bp proximal
Rr574019	regulatory region 574019	1977 bp proximal
Trim55	tripartite motif-containing 55	Intron