rs48157538 SNP Detail

Summary

• ID
  rs48157538
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:106545176 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CAGCTGCTGC TGTTGTTTGT GTGTTTGTCT GTTGTTACAT
  GGGGTCTGGC AGCTTGAACT CAGGCCCTTG AGTTTGCAAA ACCAGTGTTT TACCAGTTGA
  K
  CTATCGGCTG TCTCGAAAAC CCTCTAAGCT CATTTTTTTT AAAAAGCTTT ATATCTTGTT
  AATATATATA TATATATATA TGTTTCTAGC TTTTCTTGT                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147170304	ENSMUSSNP4027049	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs48157538					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:106545176 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Mroh7	maestro heat-like repeat family member 7			Intron
				Noncoding-Transcript-Variant
Rr596793	regulatory region 596793			653 bp proximal