rs48136274 SNP Detail

Summary

• ID
  rs48136274
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:72578864 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGTTTTTGTT CCTCAGTAAT GGTCTAGTAC CTGAAAATGA
  ATGATGAAAT AAACAGCTTT TTCTCCAAGA CACGTAAGGT CATAATGTTT ATTCACAGCA
  Y
  AGAAACCTTA GCTAAGGCAA TATATAATAG AGCAAAATAT ATTACCTTTC AAGAATGACT
  CTTATGACCC TTCCAGAAAC CTTAGTATAT TATTGTAGA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss146544650	ENSMUSSNP6276745	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs48136274					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:72578864 () rs orientation: forward

Symbol	Name	Function Class
Rr593974	regulatory region 593974	1876 bp proximal