rs48119913 SNP Detail

Summary

• ID
  rs48119913
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:151794416 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATCATACGC ATGAACACAA
  AACTAATTAT TCACTAATTA ACTAAAGGTG CCAAGGCTAC ATATGCTTCT AAGGAAATAA
  AAACAAATGA AAAATCTTGT CTATAACAAA TGTCATATTT AACCACGGTT AACAGGAGCA
  TCGGGAGACA GTAGAATTAA AACATAAGTC ACAGGAAGAT TCCCAAGATA AAACTGCTCT
  M
  GCTCAAAGCG ATGGCAAATT ACTTAAATAT GAAAAATGCC ACAAAGAATA AGAAGCTCAA
  GTGACCGCAG TTAGAACAGT AAAACCTGAA TCAACCTCCG GACAGAATTC TATCATAATA
  AAGATGAAAG CCTTTTCATG AGCTGCAGAG TATTGATCAT TAGCTGCCAC GAAGCTTGGC
  TTGCTTATTC AAGCAAAGAA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss136100658	ENSMUSSNP219220	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C	C
ss321027973	CHEV_3_151751743	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs48119913					SNP	A	C	C	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:151794416 () rs orientation: forward

Symbol	Name	Function Class
Gm31881	predicted gene, 31881	within coordinates
Rr587443	regulatory region 587443	379 bp proximal
Rr587444	regulatory region 587444	626 bp proximal