rs48069287 SNP Detail

Summary

• ID
  rs48069287
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:106546126 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTTCCCCTC CCTTATCTTT
  CCCTTCCTGC TCCCCTCCTC TTTCCTCCAC AGGGGCCAAG GTCATCAGGA CTGCTTCCTA
  AACTGGTCTC CTCCTGTAAT TTCCCACGTC CATGACAACA GGGAGGGGAC AGTGGGGATA
  GACAGCACCC CTCCCCCAGA TGCTCTATGA CCCACACAGT GACACCTTCA CAGCGTACAT
  S
  GCTTACTTCC TGCTTAGCTA CTTCAGAGAT CACTGGGCAA TATAGAGTTC AATGACCACA
  AATGCTGGTC CTCAGCACAG AGCACTTCCC AAGCCATTCT GGGGCCACTG CAAATCTGCA
  GGGTCAGTGA AAGCACTCAG CATTTCCAGC ACCCCCAGCC CCCTCCCCCA GAGTCCCCAC
  CCTGTGGACA TCCTGATAAG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss147170379	ENSMUSSNP6774960	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs48069287					SNP	G	G	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:106546126 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Mroh7	maestro heat-like repeat family member 7			Intron
				Noncoding-Transcript-Variant
Rr596793	regulatory region 596793			within coordinates