rs48063192 SNP Detail

Summary

• ID
  rs48063192
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:137311003 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGCA TTGGGTGGAG TACTAGATGC
  T
  CCATATTCCC TTCAAGTGAT TTTTT                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss147612465	ENSMUSSNP6705756	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
ss321365389	CHEV_4_137139607	CHEVERUD	SCREENING_POP	f	SNP			T	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs48063192					SNP	T	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:137311003 () rs orientation: forward

Symbol	Name	Function Class
Gm70277	predicted gene, 70277	within coordinates
Ldlrad2	low density lipoprotein receptor class A domain containing 2	1588 bp upstream
Rr602653	regulatory region 602653	1686 bp distal
Rr602654	regulatory region 602654	1469 bp distal