rs48057728 SNP Detail

Summary

• ID
  rs48057728
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:129965478 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TACAGGTGCT GAAAATTGAA TCTTGGTCCT CTGGAAGAAC
  AGGATGTGTT CTTAACTTCT GATCTGTCCT TCTAGTCCCT CTGTGACCAT TTTAAAATTG
  K
  GTTATGTTTT TGTGTTTTTC TTGATGCAAG TCCCTTATCA GACACATGCT TTGCAAACTT
  ACCCACACAC TGTGGGTTGT TTCAGATGAT GGCCATTGA                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss135892739	ENSMUSSNP5334582	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs48057728					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:129965478 () rs orientation: forward

Symbol	Name	Function Class
4930502M04Rik	RIKEN cDNA 4930502M04 gene	within coordinates
Cpgi13822	CpG island 13822	963 bp proximal
Rr585141	regulatory region 585141	976 bp proximal