rs48033301 SNP Detail

Summary

• ID
  rs48033301
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:108071187 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTCACCACA TAATAGTACA
  GTATCCGATT TTAAAATATC TTTAAATTTT TCTCAGAGTC TGGGGACTAG GGAGCTAGCT
  CATCCGAGGA GATTCCCTGT AAGTATAAGT TCAGTAATGT GGGAATGAAC CTGTGTTCTG
  TCTCCATAAC CCACATAAAA CTCCAGCTGT AATGAGACAT ACTCATAATC GCAGCATTGG
  W
  GGCTGAGGGG CTGGGGACAG GTGAATCTAA AGTCTGAATC TCGGGTTTGC TGGGCACACA
  AACGTTACTT TTACTTTGTT CTTTTCTATC TACGAAGAAA GTCATTTGAA ATACTCCAGC
  CCCAGTTTCA GCCCGTAAAG AATGTTGCTC TGGGGACACA GAGTAAGAAT TCACCTCTTG
  TCACAGTGCC AACCTGCTTA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss133494826	ENSMUSSNP5922310	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs48033301					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:108071187 () rs orientation: forward

Symbol	Name	Function Class
Rr636032	regulatory region 636032	418 bp distal
Rr636033	regulatory region 636033	1262 bp proximal