rs48030109 SNP Detail

Summary

• ID
  rs48030109
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:49449094 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACATTTGTT GTCGTTATGG
  TTCTCTCTCT CTGTCTCTCT CTGTCTCTGT CTCTGTCTCT GTCTCTGTCT CTGTCTCTCT
  CTCTCTGTCT CTCTCTGTCT CTCTGTCTTT TCAGTTCTTG GAACTAAAAT TATATATATA
  TATATATATT GGATATTTTC TTTATTTACA TTTCATATGT TTTCCCCTTT CCAAGTCTCC
  S
  CTTCAGAAGC CCCCTATCCC ATCCTCCCTT CCCATGCCTC TGTGAGGGTG CCCCCCCCCA
  CTCCCATCTT CCCTCCCTGG CATTCCCCTA CACTGGGGCA TCGAACATCC TCAGACCCAA
  GGGCCGCTTC TCCTACTGAT GTTCAACAAG GCCATCCTCT GCCACATATG TTGCCAGACT
  CATAGGTCCA TCCATGTGTA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	MSM/Ms
ss135136759	ENSMUSSNP856104	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	MSM/Ms
rs48030109					SNP	C	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:49449094 () rs orientation: forward

Symbol	Name	Function Class
Rr576096	regulatory region 576096	229 bp proximal