rs48010583 SNP Detail

Summary

• ID
  rs48010583
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:78916238 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T GAGACCTGAG AGAAAGAAGT CTTGGCTTTA ACTCTTAGGT
  TCCTTCCCAG TAAGTTAGTA GAATACGACA AAGTCTCTTT TTCTCCTGAA ACTTAAAGCA
  Y
  ACATATCTGC TGTATAGACA GCATCCTTTC ACTTCTGCAG ACTCAGGAAA TACCCACTCA
  TTAGGCATTT TACTAGATCC TAGTGATGCA TAGCTTGAAT A                    
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss146783742	ENSMUSSNP5328384	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs48010583					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:78916238 () rs orientation: forward

Symbol	Name	Function Class
Rr559926	regulatory region 559926	1228 bp proximal
Rr559927	regulatory region 559927	1262 bp proximal
Rr559928	regulatory region 559928	1533 bp proximal