TGTCTCTGTT TGTGGTTGTG TGTATACGTG CGTGCTCAGG TAGATATGTG TGCAGACACA TGTAGACAAT TCGGTTTTGT CCTCTGGCTC TCTCATCCTA Y CTTGTTTTTT TTTTTTTTTT TTTTTTTTTT TGAGACAAGA TCTCTCAGTG GTCTGGAGCT TGTCAAGGAG GACAGGCTGT CTGGGCTGCA AGCCCAGGCA Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
NOD/ShiLtJ |
NZW/LacJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss60915318 | NES16222703 | PERLEGEN | MM_PANEL2 | f | SNP | T | T | T | T | T | T | C | T | T | T | T | T |
SNP Consensus Information | |||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
NOD/ShiLtJ |
NZW/LacJ |
||||
rs47997794 | SNP | T | T | T | T | T | T | C | T | T | T | T | T |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss60915318 | NES16222703 | PERLEGEN | MM_PANEL | f | SNP | C/T |
Location: Chr6:97857446 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Mitf | melanogenesis associated transcription factor | Intron | ||||||
Rr635233 | regulatory region 635233 | within coordinates | ||||||
Rr635234 | regulatory region 635234 | 1446 bp proximal | ||||||
Tssr57900 | transcription start site region 57900 | 30 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
||
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support. |
last database update 03/18/2025 MGI 6.24 |
![]() |
|