rs47996174 SNP Detail

Summary

• ID
  rs47996174
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:37841595 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAGTTGCTAC TGCAGTGAGA AAAGCAAAGT CACTGTTAGC
  AGGAGCTATA GCAAATAGTG GTATCATTTC TCGGGAGACA TGGGTAATAG AGCCGAGACC
  T
  GATCCTGTCA CCCTGAGACC TGATTCTGTC ACTCAGAGAT CTGATCTTGT TACCCTGAGA
  CCTGTTTCTG TCATCCCGAG ACTGCCCCTC TCACCCTGA                       
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss134813974	ENSMUSSNP2461654	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	A/J
rs47996174					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:37841595 () rs orientation: forward

Symbol	Name	Function Class
Rr575564	regulatory region 575564	325 bp distal
Rr575565	regulatory region 575565	905 bp proximal
Rr575566	regulatory region 575566	1876 bp proximal