rs47994337 SNP Detail

Summary

• ID
  rs47994337
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:69418657 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGTAT GGCAGAAAGG GGAGGGGGGT
  W
  TGAGGCGGTG TGGATGGGGG ATGAC                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss146729501	ENSMUSSNP5182151	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs47994337					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:69418657 () rs orientation: forward

Symbol	Name	Function Class
Cpgi11710	CpG island 11710	1807 bp distal
Cpgi11711	CpG island 11711	93 bp distal
Rr558428	regulatory region 558428	1758 bp distal
Rr558429	regulatory region 558429	1213 bp distal
Rr558430	regulatory region 558430	within coordinates