rs47993245 SNP Detail

Summary

• ID
  rs47993245
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:102276667 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGTATGGAC TGAGATTCAG
  GATTAGCTCG AAAGGAGAAA GGACTCTGAT ACCAGATCTC TCTCTCTCTC TCTGCTTCCT
  GACTGCCTAT GCATTGTGAC CAGCTGTCTT ACACTCCTGC TGCTGTTCTT CCACAGCACA
  CTGCCATCTA AGACTCTGGG TCAAAATCAA CCCTCCCTCT CTTAAGTTGC CTTTGGTAAC
  R
  GAGTTTTTAT TTTACCGTAT GGGAGTAATT CTGGTGCTTC CAGAGCCACT GGGGGCTTTC
  CTTCCTCATT CTCCTCCATT CTGTTTGTCT TCTTCTCACT ATTTGGGATC AGTTGTTGTG
  TGGGGTGAAG CAGTACATGG AGGGGCAAAG TAGCACCCAA GGTCAGATGA TCCATGACTC
  ATAAATAGCT TCTAATATCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	LG/J	SM/J
ss147112183	ENSMUSSNP2985594	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
ss320437714	CHEV_2_102286479	CHEVERUD	SCREENING_POP	f	SNP		A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	LG/J	SM/J
rs47993245					SNP	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:102276667 () rs orientation: forward

Symbol	Name	Function Class
Rr561693	regulatory region 561693	1502 bp proximal