rs47968387 SNP Detail

Summary

• ID
  rs47968387
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:103107404 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATGTT TTTTGAAGGT AGGGAACTGA
  R
  TGTCCTAAAT ACAACAGTCA TGACA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	MSM/Ms	SM/J
ss147139528	ENSMUSSNP684652	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	A		A
ss321236296	CHEV_4_102922812	CHEVERUD	SCREENING_POP	f	SNP				G		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	MSM/Ms	SM/J
rs47968387					SNP	A	G	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:103107404 () rs orientation: forward

Symbol	Name	Function Class
4921539E11Rik	RIKEN cDNA 4921539E11 gene	Intron
Rr376942	regulatory region 376942	259 bp downstream
Rr596380	regulatory region 596380	181 bp distal