rs47950758 SNP Detail

Summary

• ID
  rs47950758
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:18907509 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACTGTGCAT CTTTGTCTGG
  AGACAAGCAG GTTGCTAGTA AAGCACCTCT GGAAAATCAT GCATTTATTT CTGTAGACAG
  TAGGTGGCAT CTAAGTTTCA CAAATAAACT GATGATTCAT ATGCCTGTAT TAGGAAATGA
  ATGTTTCAAA CTAATCAAAA ATTTAATTTA AATAGTATTT GTTATAGTTT ACCTTGCTGT
  M
  TTAATTATCT AAAGGAATAT ACAATTTTCT GAAGTTTAAC ACAAAGATCT TGTTATGCTT
  TGAAACACAT AACAATGTAA GTTTATTAAT GCCACTTTAC AAGCTGTTTA GCTGCACCAA
  CATAAGATAC AACATCCTGC TACCTGAAAC TGGGCTCACC AAAGTCAGGG CTTCCAATAG
  TCAGGTGAGG AGGGCAAGGG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss133043301	ENSMUSSNP6909615	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47950758					SNP	C	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:18907509 () rs orientation: forward

Symbol	Name	Function Class
Rr626961	regulatory region 626961	107 bp distal