rs47923508 SNP Detail

Summary

• ID
  rs47923508
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:159283914 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAGAGGGTC TCTTTGTGTG
  GCCTTGGCTG TCTTTAGCTT TGTCTGTAGA CCAGGTTGGA CTCGAACTCA CAGAAATCCA
  TCAGCCTCTG CCTCTTGATC ATGCCACCAC CACCAGTTTG AGCTGACATC TTAAGGAGAG
  AAATTTGGGA AGTCTTGTGA GATAAGAGCC TTAATTTTAG GAAGGGAAGT AGCTTACATT
  R
  TGGCCAGGTA GACAATGTTG GAATCTAAAT GACTACAGGA CACCCCCTTT GATATCTACA
  GGGGAATTCT TGGTGTGTGG GAAGTAGCTA CCATACACAT TAAGGTACGT AGTACCTAAT
  CTACACTGAT TAGGAAATTG ATTTATTTTT TCTATTTCTA GAATGTTTTC TGTTCTTCCT
  TCTCAAATAA AGAAGGAAGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss148132362	ENSMUSSNP5065192	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs47923508					SNP	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:159283914 () rs orientation: forward

Symbol	Name	Function Class
Rr568916	regulatory region 568916	1665 bp proximal
Rr568917	regulatory region 568917	1756 bp proximal