rs47922182 SNP Detail

Summary

• ID
  rs47922182
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:124035867 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATTCTGAAA TTGTTTAGTA
  CTTACGTCAT TATGTTGTCA TTGAAAATTA CATGAAAGTT TTTTTTTTTA CTTGAAAGAA
  ATATTTATTT GGAATGGACT GAATTATACT GCCTTTTAAT CACAATTTAT GTATTAAAAC
  CATAACTTCT AATATGTAGA AATAGATGTA TATAAGCATT ATTAGAAGAT TATGAACATG
  R
  GGCCCTGACA TACTGAGATT AGGGTCTTAA CACAAAAAAT TATAGTAATC CCACCAGCCT
  TAATTTATTC CATGCACACA CAAAGAGACA CAAGTGTACT TGTCTGTAGC TTATGGACCA
  AGTGTCTTAG AATAAACCCT TCTCTATCTG CAACTTGATC TACTAGTACA ATTTGATCTA
  CTAGTACAAT CCTTAGACTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss135782973	ENSMUSSNP5018086	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	A
ss320926579	CHEV_3_123945136	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs47922182					SNP	A	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:124035867 () rs orientation: forward

Symbol	Name	Function Class
Rr584580	regulatory region 584580	341 bp distal