rs47919658 SNP Detail

Summary

• ID
  rs47919658
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:53458518 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTAGAAATT TTCTGCCCCA
  AGCACTGGTC AGACAGTATA ATAATACAAC AATTATTCCA TTTTATGTAC ATATAAGAAC
  TGGAAAAGGA GCACTAAAGT AATGATTTGT CTTCATTATT GACACTTATG TGGTATTCAG
  AGTATAATTC TTATCCTAAA ATCACTTTTT GTTTGCAGTT ACAACATACA ATAGCATAAA
  Y
  GATAGTATCC TGTAATTGGA GACATTTCTA ACTGTACCTG TCATGTGTTA GCTGTTACTG
  GAATTTTTTC CAATTGATTT AACCTTGGCT GCATAAATTT AAAACATGGC CAGGTTCCAA
  AAGTCTTTCA CCATTAAGTA TTGTAGTTCA AATTGTGCAC GTGCACACAC ACACACACAC
  ACACACACAC ACACACACAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss60613045	NES16309443	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs47919658					SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60613045	NES16309443	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:53458518 () rs orientation: forward

Symbol	Name	Function Class
D8Mit230	DNA segment, Chr 8, Massachusetts Institute of Technology 230	111 bp proximal
Gm23666	predicted gene, 23666	925 bp upstream