rs47913513 SNP Detail

Summary

• ID
  rs47913513
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:3966292 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTTGGAAGT GCATCATTCT
  TTTTACTCCT AAATGTTTTA AGTTATGTAT GGTTCCTATG AACAAAAACA CTCACTTAGG
  AAAATATGTA CAGTGACCCA AATCAAGAAT TCTACATTGA TAAATAGTTA TTATCCAATC
  TATATCACAT TGGAGCTTGG CATCTGACCC AGTAACATCT TATACAGGAT TTTTTTTTTT
  W
  ATGGTAAAAA TCCAGTCCTG AGTCTGGGTT CTATGAGTCT TCAGTTTTGT CTCATCTAGG
  TGAGTCTCGA GTTTTTCGCC TTTCATGCCT GATGATTTTA AGAGTATAGA CTACTTATTT
  GTAGAAGTTC TCCCTAATTT GGCCATCCCA TTACTGCCTC ATTACTGTAA GGCTTATGTT
  GTGTTGAGAG GAGCGCTGAT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss145944905	ENSMUSSNP4664207	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs47913513					SNP	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:3966292 () rs orientation: forward

Symbol	Name	Function Class
Rr588254	regulatory region 588254	1069 bp proximal
Rr588255	regulatory region 588255	1422 bp proximal