rs47837627 SNP Detail

Summary

• ID
  rs47837627
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:121996740 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTAACACACG TCCAGGGGAT GTTTGGGTGC AGGCCACAGT
  GCTGTTTACC CTGAAATACC AATTCTACCA TGCTAGAGAG CCGAACCCAC TTGGATTAAT
  R
  TAGTCTAGGT TCTTGCCATC AATGATTAAA TATACTGATA AATATTTTGT ATTAGCCAAT
  ACAACCAAGC CTGTACGTCC ACTTTTTGAA ACTGCATAC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss135736994	ENSMUSSNP979938	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
ss320909567	CHEV_3_121906009	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs47837627					SNP	G	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121996740 () rs orientation: forward

Symbol	Name	Function Class
D3Jor1	DNA segment, Chr 3, Barbara Jordan 1	755 bp proximal
Gm43158	predicted gene 43158	within coordinates
Gm46822	predicted gene, 46822	within coordinates
Rr584257	regulatory region 584257	311 bp distal
Rr584258	regulatory region 584258	533 bp proximal