rs47837320 SNP Detail

Summary

• ID
  rs47837320
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:121997026 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AACAAAACAA AACAAAACAA AACAACACCT CATAATGTTT
  TAAGTAAGTT ACAGTTTTGT GTTTGGCTAC ATTTATAGCT ATCTGTGGCT ACATGCAGTC
  M
  ATGGGCCACA GTATGGACAT GCCTATACCA TGGAGTTTTA CAAACCTGGT CATCCCATCA
  GTAAGATCTT ACTCGATCTC CCAACCTTCA GCCACTTCA                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss135737003	ENSMUSSNP6057255	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A
ss320909570	CHEV_3_121906295	CHEVERUD	SCREENING_POP	f	SNP			C	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs47837320					SNP	C	A	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121997026 () rs orientation: forward

Symbol	Name	Function Class
D3Jor1	DNA segment, Chr 3, Barbara Jordan 1	469 bp proximal
Gm43158	predicted gene 43158	within coordinates
Gm46822	predicted gene, 46822	within coordinates
Rr584257	regulatory region 584257	597 bp distal
Rr584258	regulatory region 584258	247 bp proximal