rs47835524 SNP Detail

Summary

• ID
  rs47835524
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:82268654 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCAATGTAG AGCACCTATG
  ATTGCTGGGA GAGGAATAGT CATTTTCTCC CTATTGGTTA CTTATCCATT CTCTAGCAAA
  TAACCATTGC TTCCTTAAAC TTCCAAACAA AGATTTTCTG ATGATTGGTT CTTAACTAAT
  GATTTTTCTC TCTGACTTGC ATTTTACAAT TTAATTATAA AATCTATCAT GCTTTCAACT
  R
  CTATAGTGTG CCAGGTAGTA CTCATGGCAT AAGTAAGTAA GAGTGAGAAA CCAAACTCCT
  CCCAGTAACA AATAGTACCT GATAATGCTA AAACCCGTAT GCACCTCTCA TAATCTACAT
  TCCCTTCTCT TGTGACTATT CCATTTATGT GCGAAGCTCT ATACTTTTGT GACAGTTTTG
  TGAAATAAAA AATATTGTTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	PWD/PhJ	WSB/EiJ
ss61190089	NES16699836	PERLEGEN	MM_PANEL2	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	PWD/PhJ	WSB/EiJ
rs47835524					SNP	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61190089	NES16699836	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:82268654 () rs orientation: forward

Symbol	Name	Function Class
1700008H02Rik	RIKEN cDNA 1700008H02 gene	within coordinates
1700031L13Rik	RIKEN cDNA 1700031L13 gene	1620 bp downstream