rs47816946 SNP Detail

Summary

• ID
  rs47816946
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:31612560 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTGTTTCTT ACTTACCAGA
  ATTTAATCAC ATCAGTGGTT TTCCCCAAGG AAGTGAATGT GTCACTTCCA AATAGACATC
  AGAGGGCAAT GTTGCTACTG TGTGTGATAC TTCACAGTCA CCGCTGATTT AAGGGCCAGG
  CGAGGCAGAA CACTGCTGTC ATCCCAAAGG CAGAGGCGGG AACAGAGTCA GAATTTCAAA
  R
  CCAGCCTGGC CTACATAAAA AGTTCCAAGC CAACCAGGCC TGTATAATGA GATCCTGAAT
  CCAGTCTCAA AAACAAGCAA GCAATCCAAA AAACAAAACA ACAAACCACT GTCACTCAGA
  CTTACAGTGT GCGAGACCAT CCCGCGGTCA GGTCTATATA TCATTCATTC AAGAGTTTAT
  TAAGAATTCA TTTGTGCTCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	MSM/Ms
ss137568591	ENSMUSSNP1684705	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	MSM/Ms
rs47816946					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:31612560 () rs orientation: forward

Symbol	Name	Function Class
Gm48524	predicted gene, 48524	305 bp upstream