rs47814030 SNP Detail

Summary

• ID
  rs47814030
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:124035423 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTTTAGATA TAAAGCAATA
  CTGAGCACAC CCATATCATC AGGCAGTTCA CAATGCGAGC AAAGACATCT GTTAATGGTA
  CCATGAATAG TTATGAACTG AGGTGCACAA ATGGCTTTGC CAGGAAAGCA TCGCCTCCTA
  ATTTATTTTT ATAGCAAATG GAAGCCTCAT TTTTCATGGT TGGGTAGTTT GCATTCAAAT
  R
  TACCAATAAC TTCAAATGCA ATCACTTCTA CCCAGCATGT TTTATTGAAG AGTACAGGAC
  AGAATCACTA GTGGTCTGTT AATAAGAAAC ATCTTGTTCA TCAGCAGTTT TTCTCATCCA
  TTATTTTCCT TTTTAAAATA GGTTACTTGA TACATGTTTA TTTGTAGTAA TATTTTAAAG
  GACTGACTCT TTGTCTAGAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss60445738	NES15938450	PERLEGEN	MM_PANEL2	f	SNP	G		G	G	G	G	G		G	G	A		G
ss135782967	ENSMUSSNP3308904	ENSEMBL	ENSEMBL_Sanger	f	SNP		A
ss320926577	CHEV_3_123944692	CHEVERUD	SCREENING_POP	f	SNP								G				A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs47814030					SNP	G	A	G	G	G	G	G	G	G	G	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60445738	NES15938450	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:124035423 () rs orientation: forward

Symbol	Name	Function Class
Rr584580	regulatory region 584580	within coordinates