rs47808658 SNP Detail

Summary

• ID
  rs47808658
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:132685718 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCACTAAGTA CTTAGCTTTT CACACTGCTG AACTTTGTCT
  TGGTTCTTCC CTCTTGAATT AAGTATTTTA CCTATTTAGG TTTGGTAGGA GCCCACAGTT
  G
  ATTCGGAACT TGTGAAGAGA CTCTAGAGTT TCAGAATGAC TGGGCGTTTT TAGAGAGAAT
  GACTGGGCGT TTTTAGAGAG GCTGGATATT TTGGAGAGG                       
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss135915784	ENSMUSSNP3105653	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs47808658					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:132685718 () rs orientation: forward

Symbol	Name	Function Class
Gstcd	glutathione S-transferase, C-terminal domain containing	1795 bp downstream
Rr585492	regulatory region 585492	291 bp proximal