rs47795628 SNP Detail

Summary

• ID
  rs47795628
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:62417997 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G GCCTGGGCAT CTGGGACCCC TGCTAGGCGG AAGGTGTGTA
  GGACCACGTC CTTCCACCAT TGACGGGAAG TAAGGCCACG GCTCAGGCCA TAGTTGGGGA
  A
  GTTGTGGCTC TGAGCCCGGT ATGCCTGCCT GAAGGCTTGT TCCACGGTTA TGTCTTCCAC
  CACCACTCCA TGGGCCCGGG CCTTGCTGGC ATATTCCTCC C                    
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ
ss146435103	ENSMUSSNP3247897	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ
rs47795628					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:62417997 () rs orientation: forward

Symbol	Name	Function Class
Hdhd3	haloacid dehalogenase-like hydrolase domain containing 3	Coding-NonSynonymous
Rr593324	regulatory region 593324	1002 bp proximal
Rr593325	regulatory region 593325	1672 bp proximal