rs47791136 SNP Detail

Summary

• ID
  rs47791136
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:17765269 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGAAGGGTG ACGCTGGCCC
  TTCAGGATAA CTCCAGCAAC CCTGGCCAGG AGTGGGCATT GACTTTTAGC ATCAAGAAAA
  TGAGTGCTAT TTATTTTTCA AATCCTTCCA CTGCTAGGCA AGTATGATTT TATTAGTTCT
  CATAAAACTT TTAAGATTAT CTTCTAAATT AGTCAGTAGT GCACTTAAAA GATTTGTTTT
  W
  CATAATCCCC AAGAGCTCCT TACCCCTAAG CATATGGTTC TAGGAAGGAA GGCTCAAGTG
  GTTCTTAGCT ATGGCAAATA GTATCATCTT ATACATCATG AAATTACTTA TGGATATGGT
  TGATTGTAAT AGCTGGTATG GTCTGGCTCA TCTGGTTCCG TCCTGAACTG GCAGATGGGC
  GGCCTACTAC CTAATGTGCT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss133022274	ENSMUSSNP2282601	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47791136					SNP	T	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:17765269 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr626856	regulatory region 626856			305 bp distal
St7	suppression of tumorigenicity 7			Intron
				Noncoding-Transcript-Variant