rs47766199 SNP Detail

Summary

• ID
  rs47766199
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:17674732 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGAACAAGTT ATACTTTAGG
  CTACATATGT ATATGCTTAT ACATATATAC ATTAATGAAA ACGGGGTGTT AATTTGAAAT
  AGCAAGAAGG AGGAGAGGGA AGGAAGAAAT GATGGAATCA TTTTATAATC TCAAAAGTAA
  AATCAATTAA AAAACAAACG ATTTTACCGG AGAAAGAGGC TACAAGAGTG TGGTCAGAGG
  C
  TAACTTGCTG CAGTCTATTC TCTCCTTCCA CCATGTGGGT TTGGGGGATT GAACTCGGGT
  ACCAAACTCC TTTCCCCACA GAGTCATCTG GCAGGCCAGG CTGAACATCT CTAATTACAC
  ACACTGTTTG TCGTGGTTTG AAAGAGGATT ACCCCCATAA CACTGCGTGT CTGAGTGCTC
  GGTCTGGCGT TAGTGGAACT                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss133020149	ENSMUSSNP5132811	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	A/J
rs47766199					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:17674732 () rs orientation: forward

Symbol	Name	Function Class
Rr399579	regulatory region 399579	715 bp upstream
Rr626829	regulatory region 626829	558 bp proximal
Rr626830	regulatory region 626830	841 bp proximal