rs47760769 SNP Detail

Summary

• ID
  rs47760769
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:151794331 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAGAGGCGA AGGCGAGGAC
  CAACACGCCA CCGTTTTCCC TGACGGCCAC ATGCGTGCAG TGACTCGTGA CCATGCAAAC
  ACGCACATCA TACGCATGAA CACAAAACTA ATTATTCACT AATTAACTAA AGGTGCCAAG
  GCTACATATG CTTCTAAGGA AATAAAAACA AATGAAAAAT CTTGTCTATA ACAAATGTCA
  Y
  ATTTAACCAC GGTTAACAGG AGCATCGGGA GACAGTAGAA TTAAAACATA AGTCACAGGA
  AGATTCCCAA GATAAAACTG CTCTCGCTCA AAGCGATGGC AAATTACTTA AATATGAAAA
  ATGCCACAAA GAATAAGAAG CTCAAGTGAC CGCAGTTAGA ACAGTAAAAC CTGAATCAAC
  CTCCGGACAG AATTCTATCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss136100652	ENSMUSSNP3723466	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	T
ss321027971	CHEV_3_151751658	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs47760769					SNP	C	T	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:151794331 () rs orientation: forward

Symbol	Name	Function Class
Gm31881	predicted gene, 31881	within coordinates
Rr587443	regulatory region 587443	464 bp proximal
Rr587444	regulatory region 587444	711 bp proximal